Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Gm14208-201ENSMUST00000119645 678 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Gm24749-201ENSMUST00000157838 343 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm27627-201ENSMUST00000183644 150 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm29615-201ENSMUST00000185371 697 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm28224-201ENSMUST00000186078 697 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm29001-201ENSMUST00000186177 697 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm28292-201ENSMUST00000186593 697 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm28101-201ENSMUST00000187608 697 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm29076-201ENSMUST00000187689 697 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm28302-201ENSMUST00000187931 697 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm28646-201ENSMUST00000188220 697 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm28205-201ENSMUST00000189177 697 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm29032-201ENSMUST00000189797 697 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm28695-201ENSMUST00000190300 697 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm37448-201ENSMUST00000192795 697 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.01□□□□□ -0.49
Lim2P56563 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.01□□□□□ -0.49
Lim2P56563 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.01□□□□□ -0.49
Lim2P56563 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.01□□□□□ -0.49
Lim2P56563 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lim2P56563 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.01□□□□□ -0.49
Lim2P56563 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.01□□□□□ -0.49
Lim2P56563 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12□□□□□ -0.49
Lim2P56563 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12□□□□□ -0.49
Lim2P56563 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Gm42913-201ENSMUST00000197936 1853 ntBASIC12□□□□□ -0.49
Lim2P56563 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lim2P56563 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Lim2P56563 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Gm11439-201ENSMUST00000118598 409 ntBASIC12□□□□□ -0.49
Lim2P56563 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Gm14247-201ENSMUST00000120950 237 ntBASIC12□□□□□ -0.49
Lim2P56563 Gm14277-201ENSMUST00000121195 360 ntBASIC12□□□□□ -0.49
Lim2P56563 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Gm24990-201ENSMUST00000157406 323 ntBASIC12□□□□□ -0.49
Lim2P56563 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12□□□□□ -0.49
Lim2P56563 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Lim2P56563 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Lim2P56563 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12□□□□□ -0.49
Lim2P56563 Gm43172-201ENSMUST00000202139 2137 ntBASIC12□□□□□ -0.49
Lim2P56563 Gm43962-201ENSMUST00000203898 190 ntBASIC12□□□□□ -0.49
Lim2P56563 CT571245.2-201ENSMUST00000218421 305 ntBASIC12□□□□□ -0.49
Lim2P56563 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 CT485787.1-201ENSMUST00000225617 968 ntBASIC12□□□□□ -0.49
Lim2P56563 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12□□□□□ -0.49
Lim2P56563 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Lim2P56563 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12□□□□□ -0.49
Lim2P56563 Gm43417-201ENSMUST00000201586 5207 ntBASIC12□□□□□ -0.49
Lim2P56563 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lim2P56563 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms