Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.54□□□□□ -0.24
Rrp1P56183 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.54□□□□□ -0.24
Rrp1P56183 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rrp1P56183 Gm8420-201ENSMUST00000097103 598 ntBASIC13.54□□□□□ -0.24
Rrp1P56183 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rrp1P56183 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp1P56183 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Rrp1P56183 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.53□□□□□ -0.24
Rrp1P56183 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.53□□□□□ -0.24
Rrp1P56183 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Rrp1P56183 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.53□□□□□ -0.24
Rrp1P56183 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rrp1P56183 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.53□□□□□ -0.24
Rrp1P56183 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.53□□□□□ -0.24
Rrp1P56183 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Gm9899-201ENSMUST00000065519 555 ntBASIC13.53□□□□□ -0.24
Rrp1P56183 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rrp1P56183 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rrp1P56183 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.53□□□□□ -0.24
Rrp1P56183 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rrp1P56183 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.53□□□□□ -0.24
Rrp1P56183 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.53□□□□□ -0.24
Rrp1P56183 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Rrp1P56183 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp1P56183 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp1P56183 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Rrp1P56183 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp1P56183 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp1P56183 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Rrp1P56183 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp1P56183 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp1P56183 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp1P56183 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.52□□□□□ -0.24
Rrp1P56183 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rrp1P56183 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rrp1P56183 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.52□□□□□ -0.25
Rrp1P56183 Gm15610-201ENSMUST00000120584 195 ntBASIC13.52□□□□□ -0.25
Rrp1P56183 Gm14832-201ENSMUST00000121289 322 ntBASIC13.52□□□□□ -0.25
Rrp1P56183 Gm24845-201ENSMUST00000158034 109 ntBASIC13.52□□□□□ -0.25
Rrp1P56183 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
Rrp1P56183 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.52□□□□□ -0.25
Rrp1P56183 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp1P56183 Gm19994-201ENSMUST00000217086 586 ntBASIC13.52□□□□□ -0.25
Rrp1P56183 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Rrp1P56183 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp1P56183 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp1P56183 Gm9996-201ENSMUST00000070359 913 ntBASIC13.52□□□□□ -0.25
Rrp1P56183 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp1P56183 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp1P56183 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.52□□□□□ -0.25
Rrp1P56183 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Rrp1P56183 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rrp1P56183 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rrp1P56183 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp1P56183 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp1P56183 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp1P56183 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rrp1P56183 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp1P56183 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp1P56183 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp1P56183 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.51□□□□□ -0.25
Rrp1P56183 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.51□□□□□ -0.25
Rrp1P56183 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.51□□□□□ -0.25
Rrp1P56183 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.51□□□□□ -0.25
Rrp1P56183 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Rrp1P56183 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp1P56183 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms