Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.98□□□□□ -0.65
Cdh11P55288 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.98□□□□□ -0.65
Cdh11P55288 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdh11P55288 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.98□□□□□ -0.65
Cdh11P55288 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.98□□□□□ -0.65
Cdh11P55288 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdh11P55288 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
Cdh11P55288 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Cdh11P55288 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cdh11P55288 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdh11P55288 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdh11P55288 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cdh11P55288 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cdh11P55288 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdh11P55288 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cdh11P55288 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Gm24231-201ENSMUST00000104315 133 ntBASIC10.97□□□□□ -0.65
Cdh11P55288 Gm13492-201ENSMUST00000119772 665 ntBASIC10.97□□□□□ -0.65
Cdh11P55288 Gm11964-201ENSMUST00000120982 444 ntBASIC10.97□□□□□ -0.65
Cdh11P55288 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.97□□□□□ -0.65
Cdh11P55288 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.97□□□□□ -0.65
Cdh11P55288 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.97□□□□□ -0.65
Cdh11P55288 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdh11P55288 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Cdh11P55288 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cdh11P55288 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdh11P55288 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdh11P55288 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.97□□□□□ -0.65
Cdh11P55288 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cdh11P55288 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.97□□□□□ -0.65
Cdh11P55288 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cdh11P55288 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdh11P55288 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cdh11P55288 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cdh11P55288 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cdh11P55288 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.96□□□□□ -0.65
Cdh11P55288 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.96□□□□□ -0.65
Cdh11P55288 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.96□□□□□ -0.65
Cdh11P55288 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.96□□□□□ -0.65
Cdh11P55288 Snord83b-201ENSMUST00000104546 94 ntBASIC10.96□□□□□ -0.65
Cdh11P55288 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.96□□□□□ -0.65
Cdh11P55288 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Cdh11P55288 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.96□□□□□ -0.65
Cdh11P55288 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdh11P55288 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.96□□□□□ -0.65
Cdh11P55288 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdh11P55288 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh11P55288 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh11P55288 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh11P55288 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh11P55288 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdh11P55288 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cdh11P55288 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms