Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.8□□□□□ -0.36
NrlP54846 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.8□□□□□ -0.36
NrlP54846 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.8□□□□□ -0.36
NrlP54846 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.79□□□□□ -0.36
NrlP54846 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.79□□□□□ -0.36
NrlP54846 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NrlP54846 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.79□□□□□ -0.36
NrlP54846 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NrlP54846 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Gm17831-201ENSMUST00000205579 900 ntBASIC12.79□□□□□ -0.36
NrlP54846 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.79□□□□□ -0.36
NrlP54846 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.79□□□□□ -0.36
NrlP54846 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.79□□□□□ -0.36
NrlP54846 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NrlP54846 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NrlP54846 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NrlP54846 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.79□□□□□ -0.36
NrlP54846 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.79□□□□□ -0.36
NrlP54846 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NrlP54846 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
NrlP54846 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NrlP54846 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.78□□□□□ -0.36
NrlP54846 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.78□□□□□ -0.36
NrlP54846 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.78□□□□□ -0.36
NrlP54846 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.78□□□□□ -0.36
NrlP54846 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NrlP54846 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NrlP54846 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NrlP54846 Gm23912-201ENSMUST00000104687 87 ntBASIC12.78□□□□□ -0.36
NrlP54846 Gm11663-201ENSMUST00000117888 290 ntBASIC12.78□□□□□ -0.36
NrlP54846 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.78□□□□□ -0.36
NrlP54846 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
NrlP54846 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.78□□□□□ -0.36
NrlP54846 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.78□□□□□ -0.36
NrlP54846 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.78□□□□□ -0.36
NrlP54846 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.78□□□□□ -0.36
NrlP54846 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.78□□□□□ -0.36
NrlP54846 Gm19287-201ENSMUST00000203190 358 ntBASIC12.78□□□□□ -0.36
NrlP54846 Gm8956-201ENSMUST00000203939 825 ntBASIC12.78□□□□□ -0.36
NrlP54846 Gm9463-201ENSMUST00000206707 601 ntBASIC12.78□□□□□ -0.36
NrlP54846 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.78□□□□□ -0.36
NrlP54846 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.78□□□□□ -0.36
NrlP54846 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.78□□□□□ -0.36
NrlP54846 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms