Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.98□□□□□ -0.49
Atxn1P54254 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Atxn1P54254 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.98□□□□□ -0.49
Atxn1P54254 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.98□□□□□ -0.49
Atxn1P54254 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.98□□□□□ -0.49
Atxn1P54254 Gm807-202ENSMUST00000224929 408 ntBASIC11.98□□□□□ -0.49
Atxn1P54254 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Atxn1P54254 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Atxn1P54254 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Atxn1P54254 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Atxn1P54254 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Atxn1P54254 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Atxn1P54254 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.97□□□□□ -0.49
Atxn1P54254 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Atxn1P54254 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.97□□□□□ -0.49
Atxn1P54254 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Atxn1P54254 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.97□□□□□ -0.49
Atxn1P54254 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Gm13809-201ENSMUST00000117921 597 ntBASIC11.97□□□□□ -0.49
Atxn1P54254 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.97□□□□□ -0.49
Atxn1P54254 Gm14921-201ENSMUST00000118643 908 ntBASIC11.97□□□□□ -0.49
Atxn1P54254 Gm11956-201ENSMUST00000119525 512 ntBASIC11.97□□□□□ -0.49
Atxn1P54254 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.97□□□□□ -0.49
Atxn1P54254 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.97□□□□□ -0.49
Atxn1P54254 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.97□□□□□ -0.49
Atxn1P54254 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Mir339-201ENSMUST00000083659 96 ntBASIC11.97□□□□□ -0.49
Atxn1P54254 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.97□□□□□ -0.49
Atxn1P54254 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Atxn1P54254 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Atxn1P54254 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.96□□□□□ -0.49
Atxn1P54254 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Atxn1P54254 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.96□□□□□ -0.49
Atxn1P54254 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.96□□□□□ -0.49
Atxn1P54254 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Atxn1P54254 Gm11989-201ENSMUST00000117240 672 ntBASIC11.96□□□□□ -0.49
Atxn1P54254 Gm11362-201ENSMUST00000118838 850 ntBASIC11.96□□□□□ -0.49
Atxn1P54254 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.96□□□□□ -0.49
Atxn1P54254 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.96□□□□□ -0.49
Atxn1P54254 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.96□□□□□ -0.49
Atxn1P54254 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Atxn1P54254 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.96□□□□□ -0.49
Atxn1P54254 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Atxn1P54254 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Atxn1P54254 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Atxn1P54254 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Atxn1P54254 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.96□□□□□ -0.5
Atxn1P54254 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Atxn1P54254 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.96□□□□□ -0.5
Atxn1P54254 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Atxn1P54254 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms