Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lbx1P52955 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lbx1P52955 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lbx1P52955 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.68□□□□□ -0.54
Lbx1P52955 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lbx1P52955 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lbx1P52955 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lbx1P52955 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lbx1P52955 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lbx1P52955 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lbx1P52955 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.67□□□□□ -0.54
Lbx1P52955 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.67□□□□□ -0.54
Lbx1P52955 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC11.67□□□□□ -0.54
Lbx1P52955 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.67□□□□□ -0.54
Lbx1P52955 Gm11500-201ENSMUST00000118237 601 ntBASIC11.67□□□□□ -0.54
Lbx1P52955 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.67□□□□□ -0.54
Lbx1P52955 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lbx1P52955 Gm25830-201ENSMUST00000158923 132 ntBASIC11.67□□□□□ -0.54
Lbx1P52955 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lbx1P52955 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lbx1P52955 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.67□□□□□ -0.54
Lbx1P52955 Mir7088-201ENSMUST00000184227 86 ntBASIC11.67□□□□□ -0.54
Lbx1P52955 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.67□□□□□ -0.54
Lbx1P52955 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Lbx1P52955 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.67□□□□□ -0.54
Lbx1P52955 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.67□□□□□ -0.54
Lbx1P52955 BC080696-201ENSMUST00000202858 1218 ntBASIC11.67□□□□□ -0.54
Lbx1P52955 Gm44315-201ENSMUST00000203041 219 ntBASIC11.67□□□□□ -0.54
Lbx1P52955 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC11.67□□□□□ -0.54
Lbx1P52955 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.67□□□□□ -0.54
Lbx1P52955 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lbx1P52955 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Gm7701-201ENSMUST00000163185 1479 ntBASIC11.67□□□□□ -0.54
Lbx1P52955 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Lbx1P52955 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Lbx1P52955 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.67□□□□□ -0.54
Lbx1P52955 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lbx1P52955 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.66□□□□□ -0.54
Lbx1P52955 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.66□□□□□ -0.54
Lbx1P52955 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Lbx1P52955 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Lbx1P52955 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.66□□□□□ -0.54
Lbx1P52955 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Lbx1P52955 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Lbx1P52955 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Lbx1P52955 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 Gm11511-201ENSMUST00000118146 540 ntBASIC11.66□□□□□ -0.54
Lbx1P52955 Gm15982-201ENSMUST00000121681 554 ntBASIC11.66□□□□□ -0.54
Lbx1P52955 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 Gm24844-201ENSMUST00000158679 127 ntBASIC11.66□□□□□ -0.54
Lbx1P52955 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC11.66□□□□□ -0.54
Lbx1P52955 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Lbx1P52955 Gm27956-201ENSMUST00000175604 260 ntBASIC11.66□□□□□ -0.54
Lbx1P52955 Kif4-ps-202ENSMUST00000185083 652 ntBASIC11.66□□□□□ -0.54
Lbx1P52955 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC11.66□□□□□ -0.54
Lbx1P52955 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC11.66□□□□□ -0.54
Lbx1P52955 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.66□□□□□ -0.54
Lbx1P52955 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Lbx1P52955 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.66□□□□□ -0.54
Lbx1P52955 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Lbx1P52955 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lbx1P52955 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms