Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.15□□□□□ -0.46
Lhx3P50481 Gm2553-201ENSMUST00000215986 605 ntBASIC12.15□□□□□ -0.46
Lhx3P50481 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx3P50481 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lhx3P50481 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx3P50481 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx3P50481 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.15□□□□□ -0.46
Lhx3P50481 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx3P50481 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx3P50481 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lhx3P50481 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lhx3P50481 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Lhx3P50481 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lhx3P50481 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lhx3P50481 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Gm7851-201ENSMUST00000117574 323 ntBASIC12.14□□□□□ -0.47
Lhx3P50481 Gm11663-201ENSMUST00000117888 290 ntBASIC12.14□□□□□ -0.47
Lhx3P50481 Gm8199-201ENSMUST00000121323 823 ntBASIC12.14□□□□□ -0.47
Lhx3P50481 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.14□□□□□ -0.47
Lhx3P50481 Gm18827-201ENSMUST00000188341 790 ntBASIC12.14□□□□□ -0.47
Lhx3P50481 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.14□□□□□ -0.47
Lhx3P50481 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.14□□□□□ -0.47
Lhx3P50481 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.14□□□□□ -0.47
Lhx3P50481 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Lhx3P50481 Matn2-203ENSMUST00000226766 3252 ntBASIC12.14□□□□□ -0.47
Lhx3P50481 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Lhx3P50481 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lhx3P50481 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Lhx3P50481 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx3P50481 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lhx3P50481 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Lhx3P50481 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.13□□□□□ -0.47
Lhx3P50481 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.13□□□□□ -0.47
Lhx3P50481 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Lhx3P50481 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Lhx3P50481 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.13□□□□□ -0.47
Lhx3P50481 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Gm10288-201ENSMUST00000084614 537 ntBASIC12.13□□□□□ -0.47
Lhx3P50481 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.13□□□□□ -0.47
Lhx3P50481 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lhx3P50481 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lhx3P50481 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx3P50481 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.12□□□□□ -0.47
Lhx3P50481 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lhx3P50481 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Lhx3P50481 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lhx3P50481 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.12□□□□□ -0.47
Lhx3P50481 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.12□□□□□ -0.47
Lhx3P50481 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx3P50481 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms