Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Brca1P48754 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Brca1P48754 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.26□□□□□ -0.29
Brca1P48754 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.26□□□□□ -0.29
Brca1P48754 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.26□□□□□ -0.29
Brca1P48754 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Brca1P48754 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Gm25148-201ENSMUST00000104611 123 ntBASIC13.25□□□□□ -0.29
Brca1P48754 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.25□□□□□ -0.29
Brca1P48754 Gm16459-201ENSMUST00000121443 686 ntBASIC13.25□□□□□ -0.29
Brca1P48754 Gm24954-201ENSMUST00000178831 110 ntBASIC13.25□□□□□ -0.29
Brca1P48754 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.25□□□□□ -0.29
Brca1P48754 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.25□□□□□ -0.29
Brca1P48754 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.25□□□□□ -0.29
Brca1P48754 AC138716.2-201ENSMUST00000226670 1016 ntBASIC13.25□□□□□ -0.29
Brca1P48754 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Brca1P48754 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Brca1P48754 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
Brca1P48754 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.25□□□□□ -0.29
Brca1P48754 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Brca1P48754 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC13.25□□□□□ -0.29
Brca1P48754 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC13.25□□□□□ -0.29
Brca1P48754 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Gm7741-201ENSMUST00000181445 989 ntBASIC13.25□□□□□ -0.29
Brca1P48754 Gm9081-201ENSMUST00000182346 991 ntBASIC13.25□□□□□ -0.29
Brca1P48754 Gm7069-201ENSMUST00000182418 1008 ntBASIC13.25□□□□□ -0.29
Brca1P48754 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Gm18035-201ENSMUST00000211962 589 ntBASIC13.25□□□□□ -0.29
Brca1P48754 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Brca1P48754 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Brca1P48754 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.25□□□□□ -0.29
Brca1P48754 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.25□□□□□ -0.29
Brca1P48754 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Brca1P48754 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Brca1P48754 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Brca1P48754 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.24□□□□□ -0.29
Brca1P48754 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.24□□□□□ -0.29
Brca1P48754 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.24□□□□□ -0.29
Brca1P48754 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.24□□□□□ -0.29
Brca1P48754 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
Brca1P48754 Gm11996-201ENSMUST00000117538 915 ntBASIC13.24□□□□□ -0.29
Brca1P48754 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC13.24□□□□□ -0.29
Brca1P48754 Gm6564-201ENSMUST00000075377 619 ntBASIC13.24□□□□□ -0.29
Brca1P48754 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brca1P48754 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.23□□□□□ -0.29
Brca1P48754 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.23□□□□□ -0.29
Brca1P48754 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.23□□□□□ -0.29
Brca1P48754 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.23□□□□□ -0.29
Brca1P48754 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Brca1P48754 Gm23255-201ENSMUST00000102244 110 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Brca1P48754 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms