Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.62□□□□□ -0.39
LmnaP48678 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC12.62□□□□□ -0.39
LmnaP48678 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.62□□□□□ -0.39
LmnaP48678 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LmnaP48678 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Gm649-201ENSMUST00000117284 1054 ntBASIC12.62□□□□□ -0.39
LmnaP48678 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.62□□□□□ -0.39
LmnaP48678 Gm11675-201ENSMUST00000121873 832 ntBASIC12.62□□□□□ -0.39
LmnaP48678 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.62□□□□□ -0.39
LmnaP48678 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.62□□□□□ -0.39
LmnaP48678 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.62□□□□□ -0.39
LmnaP48678 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.62□□□□□ -0.39
LmnaP48678 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.62□□□□□ -0.39
LmnaP48678 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.62□□□□□ -0.39
LmnaP48678 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.62□□□□□ -0.39
LmnaP48678 Gm45224-201ENSMUST00000208203 414 ntBASIC12.62□□□□□ -0.39
LmnaP48678 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.62□□□□□ -0.39
LmnaP48678 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.62□□□□□ -0.39
LmnaP48678 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.62□□□□□ -0.39
LmnaP48678 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.62□□□□□ -0.39
LmnaP48678 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.62□□□□□ -0.39
LmnaP48678 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.62□□□□□ -0.39
LmnaP48678 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.62□□□□□ -0.39
LmnaP48678 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.62□□□□□ -0.39
LmnaP48678 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.62□□□□□ -0.39
LmnaP48678 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LmnaP48678 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LmnaP48678 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LmnaP48678 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LmnaP48678 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.62□□□□□ -0.39
LmnaP48678 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.61□□□□□ -0.39
LmnaP48678 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LmnaP48678 Gm12795-201ENSMUST00000117594 539 ntBASIC12.61□□□□□ -0.39
LmnaP48678 Gm12029-201ENSMUST00000120073 832 ntBASIC12.61□□□□□ -0.39
LmnaP48678 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.61□□□□□ -0.39
LmnaP48678 Rprl1-202ENSMUST00000198476 238 ntBASIC12.61□□□□□ -0.39
LmnaP48678 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC12.61□□□□□ -0.39
LmnaP48678 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Gm45610-201ENSMUST00000209227 784 ntBASIC12.61□□□□□ -0.39
LmnaP48678 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC12.61□□□□□ -0.39
LmnaP48678 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.61□□□□□ -0.39
LmnaP48678 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LmnaP48678 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LmnaP48678 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.61□□□□□ -0.39
LmnaP48678 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
LmnaP48678 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LmnaP48678 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LmnaP48678 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LmnaP48678 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.6□□□□□ -0.39
LmnaP48678 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.6□□□□□ -0.39
LmnaP48678 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LmnaP48678 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LmnaP48678 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LmnaP48678 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LmnaP48678 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LmnaP48678 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LmnaP48678 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.6□□□□□ -0.39
LmnaP48678 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.6□□□□□ -0.39
LmnaP48678 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.6□□□□□ -0.39
LmnaP48678 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.6□□□□□ -0.39
LmnaP48678 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms