Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Mir5132-201ENSMUST00000175166 71 ntBASIC12.21□□□□□ -0.45
Vps4bP46467 Gm5706-201ENSMUST00000181525 993 ntBASIC12.21□□□□□ -0.45
Vps4bP46467 Mir8109-201ENSMUST00000184375 117 ntBASIC12.21□□□□□ -0.45
Vps4bP46467 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.21□□□□□ -0.45
Vps4bP46467 Gm9368-201ENSMUST00000219348 831 ntBASIC12.21□□□□□ -0.45
Vps4bP46467 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.21□□□□□ -0.45
Vps4bP46467 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.21□□□□□ -0.45
Vps4bP46467 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Vps4bP46467 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Vps4bP46467 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.21□□□□□ -0.45
Vps4bP46467 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.21□□□□□ -0.45
Vps4bP46467 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.21□□□□□ -0.46
Vps4bP46467 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps4bP46467 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.21□□□□□ -0.46
Vps4bP46467 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps4bP46467 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Vps4bP46467 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Vps4bP46467 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps4bP46467 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps4bP46467 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Vps4bP46467 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.2□□□□□ -0.46
Vps4bP46467 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vps4bP46467 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Vps4bP46467 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vps4bP46467 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Vps4bP46467 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Vps4bP46467 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.2□□□□□ -0.46
Vps4bP46467 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.2□□□□□ -0.46
Vps4bP46467 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.2□□□□□ -0.46
Vps4bP46467 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.2□□□□□ -0.46
Vps4bP46467 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Rprl1-201ENSMUST00000158050 327 ntBASIC12.2□□□□□ -0.46
Vps4bP46467 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.2□□□□□ -0.46
Vps4bP46467 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Vps4bP46467 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.2□□□□□ -0.46
Vps4bP46467 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.2□□□□□ -0.46
Vps4bP46467 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.2□□□□□ -0.46
Vps4bP46467 Gm9996-201ENSMUST00000070359 913 ntBASIC12.2□□□□□ -0.46
Vps4bP46467 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.2□□□□□ -0.46
Vps4bP46467 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vps4bP46467 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.2□□□□□ -0.46
Vps4bP46467 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps4bP46467 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.2□□□□□ -0.46
Vps4bP46467 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vps4bP46467 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.19□□□□□ -0.46
Vps4bP46467 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vps4bP46467 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vps4bP46467 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Gm22018-201ENSMUST00000104357 131 ntBASIC12.19□□□□□ -0.46
Vps4bP46467 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.19□□□□□ -0.46
Vps4bP46467 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.19□□□□□ -0.46
Vps4bP46467 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps4bP46467 Gm43133-201ENSMUST00000197472 463 ntBASIC12.19□□□□□ -0.46
Vps4bP46467 Gm3786-201ENSMUST00000202659 378 ntBASIC12.19□□□□□ -0.46
Vps4bP46467 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms