Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.39□□□□□ -0.59
Nkx2-6P43688 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.39□□□□□ -0.59
Nkx2-6P43688 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Gm1821-202ENSMUST00000227415 750 ntBASIC11.39□□□□□ -0.59
Nkx2-6P43688 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Gm10179-201ENSMUST00000086233 688 ntBASIC11.39□□□□□ -0.59
Nkx2-6P43688 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.39□□□□□ -0.59
Nkx2-6P43688 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-6P43688 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.38□□□□□ -0.59
Nkx2-6P43688 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Gm44882-201ENSMUST00000205702 802 ntBASIC11.38□□□□□ -0.59
Nkx2-6P43688 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.38□□□□□ -0.59
Nkx2-6P43688 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Ginm1-202ENSMUST00000065124 300 ntBASIC11.38□□□□□ -0.59
Nkx2-6P43688 Gm5705-201ENSMUST00000066241 711 ntBASIC11.38□□□□□ -0.59
Nkx2-6P43688 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Nkx2-6P43688 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx2-6P43688 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.38□□□□□ -0.59
Nkx2-6P43688 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.38□□□□□ -0.59
Nkx2-6P43688 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.37□□□□□ -0.59
Nkx2-6P43688 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nkx2-6P43688 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nkx2-6P43688 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Gm11509-201ENSMUST00000117358 325 ntBASIC11.37□□□□□ -0.59
Nkx2-6P43688 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Gm7722-201ENSMUST00000120646 741 ntBASIC11.37□□□□□ -0.59
Nkx2-6P43688 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.37□□□□□ -0.59
Nkx2-6P43688 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Gm9630-201ENSMUST00000178304 885 ntBASIC11.37□□□□□ -0.59
Nkx2-6P43688 Gm10774-201ENSMUST00000188689 204 ntBASIC11.37□□□□□ -0.59
Nkx2-6P43688 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Gm44551-201ENSMUST00000208804 171 ntBASIC11.37□□□□□ -0.59
Nkx2-6P43688 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.37□□□□□ -0.59
Nkx2-6P43688 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.37□□□□□ -0.59
Nkx2-6P43688 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-6P43688 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms