Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sox6P40645 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Sox6P40645 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.3□□□□□ -0.6
Sox6P40645 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Gm10434-201ENSMUST00000101158 471 ntBASIC11.3□□□□□ -0.6
Sox6P40645 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.3□□□□□ -0.6
Sox6P40645 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.3□□□□□ -0.6
Sox6P40645 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Sox6P40645 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.3□□□□□ -0.6
Sox6P40645 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.3□□□□□ -0.6
Sox6P40645 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox6P40645 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox6P40645 Gm19309-201ENSMUST00000218295 205 ntBASIC11.3□□□□□ -0.6
Sox6P40645 Gm45925-201ENSMUST00000218882 744 ntBASIC11.3□□□□□ -0.6
Sox6P40645 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox6P40645 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox6P40645 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.3□□□□□ -0.6
Sox6P40645 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sox6P40645 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox6P40645 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox6P40645 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox6P40645 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Sox6P40645 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.29□□□□□ -0.6
Sox6P40645 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.29□□□□□ -0.6
Sox6P40645 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox6P40645 Gm45930-201ENSMUST00000221330 292 ntBASIC11.29□□□□□ -0.6
Sox6P40645 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sox6P40645 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sox6P40645 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sox6P40645 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox6P40645 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sox6P40645 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sox6P40645 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sox6P40645 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox6P40645 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox6P40645 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sox6P40645 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms