Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.1□□□□□ -0.47
Fen1P39749 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.1□□□□□ -0.47
Fen1P39749 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Fen1P39749 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Fen1P39749 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fen1P39749 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.1□□□□□ -0.47
Fen1P39749 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.1□□□□□ -0.47
Fen1P39749 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.09□□□□□ -0.47
Fen1P39749 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Fen1P39749 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.09□□□□□ -0.47
Fen1P39749 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.09□□□□□ -0.47
Fen1P39749 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Fen1P39749 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Gm22331-201ENSMUST00000158066 136 ntBASIC12.09□□□□□ -0.47
Fen1P39749 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Fen1P39749 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.09□□□□□ -0.47
Fen1P39749 Gm43630-201ENSMUST00000201550 776 ntBASIC12.09□□□□□ -0.47
Fen1P39749 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.09□□□□□ -0.47
Fen1P39749 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Fen1P39749 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Fen1P39749 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.09□□□□□ -0.47
Fen1P39749 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.09□□□□□ -0.47
Fen1P39749 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fen1P39749 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Fen1P39749 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Fen1P39749 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.08□□□□□ -0.47
Fen1P39749 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Fen1P39749 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Fen1P39749 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Fen1P39749 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Fen1P39749 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Fen1P39749 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.08□□□□□ -0.48
Fen1P39749 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fen1P39749 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fen1P39749 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.08□□□□□ -0.48
Fen1P39749 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fen1P39749 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.08□□□□□ -0.48
Fen1P39749 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.08□□□□□ -0.48
Fen1P39749 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fen1P39749 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fen1P39749 Gm13492-201ENSMUST00000119772 665 ntBASIC12.08□□□□□ -0.48
Fen1P39749 Gm11964-201ENSMUST00000120982 444 ntBASIC12.08□□□□□ -0.48
Fen1P39749 Gm27847-201ENSMUST00000183711 107 ntBASIC12.08□□□□□ -0.48
Fen1P39749 Gm27375-201ENSMUST00000183799 107 ntBASIC12.08□□□□□ -0.48
Fen1P39749 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fen1P39749 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.08□□□□□ -0.48
Fen1P39749 Gm29705-201ENSMUST00000212598 474 ntBASIC12.08□□□□□ -0.48
Fen1P39749 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.08□□□□□ -0.48
Fen1P39749 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.08□□□□□ -0.48
Fen1P39749 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fen1P39749 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.08□□□□□ -0.48
Fen1P39749 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fen1P39749 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fen1P39749 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fen1P39749 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fen1P39749 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.07□□□□□ -0.48
Fen1P39749 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Fen1P39749 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fen1P39749 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms