Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfc1P35601 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.67□□□□□ -0.38
Rfc1P35601 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfc1P35601 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfc1P35601 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.67□□□□□ -0.38
Rfc1P35601 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfc1P35601 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfc1P35601 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfc1P35601 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.66□□□□□ -0.38
Rfc1P35601 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rfc1P35601 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rfc1P35601 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rfc1P35601 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfc1P35601 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Mir1894-201ENSMUST00000122802 81 ntBASIC12.66□□□□□ -0.38
Rfc1P35601 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfc1P35601 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Gm23363-201ENSMUST00000175024 79 ntBASIC12.66□□□□□ -0.38
Rfc1P35601 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfc1P35601 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.66□□□□□ -0.38
Rfc1P35601 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Gm5356-201ENSMUST00000093326 615 ntBASIC12.66□□□□□ -0.38
Rfc1P35601 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.66□□□□□ -0.38
Rfc1P35601 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Rfc1P35601 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfc1P35601 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.66□□□□□ -0.38
Rfc1P35601 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rfc1P35601 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.65□□□□□ -0.38
Rfc1P35601 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.65□□□□□ -0.38
Rfc1P35601 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rfc1P35601 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Gm12490-201ENSMUST00000120255 560 ntBASIC12.65□□□□□ -0.38
Rfc1P35601 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rfc1P35601 Gm8810-201ENSMUST00000172895 754 ntBASIC12.65□□□□□ -0.38
Rfc1P35601 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.65□□□□□ -0.38
Rfc1P35601 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.65□□□□□ -0.38
Rfc1P35601 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Gm10012-201ENSMUST00000078252 192 ntBASIC12.65□□□□□ -0.38
Rfc1P35601 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.65□□□□□ -0.38
Rfc1P35601 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rfc1P35601 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfc1P35601 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Rfc1P35601 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.65□□□□□ -0.39
Rfc1P35601 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rfc1P35601 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rfc1P35601 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.64□□□□□ -0.39
Rfc1P35601 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfc1P35601 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfc1P35601 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rfc1P35601 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rfc1P35601 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfc1P35601 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfc1P35601 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rfc1P35601 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.64□□□□□ -0.39
Rfc1P35601 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.64□□□□□ -0.39
Rfc1P35601 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfc1P35601 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.64□□□□□ -0.39
Rfc1P35601 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.64□□□□□ -0.39
Rfc1P35601 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rfc1P35601 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rfc1P35601 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfc1P35601 Gm9002-201ENSMUST00000178437 499 ntBASIC12.64□□□□□ -0.39
Rfc1P35601 Gm24196-201ENSMUST00000179161 110 ntBASIC12.64□□□□□ -0.39
Rfc1P35601 Gm27892-201ENSMUST00000185017 106 ntBASIC12.64□□□□□ -0.39
Rfc1P35601 Gm37922-201ENSMUST00000195596 455 ntBASIC12.64□□□□□ -0.39
Rfc1P35601 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms