Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.49□□□□□ -0.89
Rom1P32958 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Rom1P32958 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Rom1P32958 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.49□□□□□ -0.89
Rom1P32958 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Rom1P32958 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Rom1P32958 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Rom1P32958 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Rom1P32958 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Rom1P32958 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Rom1P32958 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Gm12151-201ENSMUST00000121374 290 ntBASIC9.48□□□□□ -0.89
Rom1P32958 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.48□□□□□ -0.89
Rom1P32958 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.48□□□□□ -0.89
Rom1P32958 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Gm18711-201ENSMUST00000199341 750 ntBASIC9.48□□□□□ -0.89
Rom1P32958 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.48□□□□□ -0.89
Rom1P32958 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Gm45925-201ENSMUST00000218882 744 ntBASIC9.48□□□□□ -0.89
Rom1P32958 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC9.48□□□□□ -0.89
Rom1P32958 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.48□□□□□ -0.89
Rom1P32958 AC155252.1-201ENSMUST00000226462 1208 ntBASIC9.48□□□□□ -0.89
Rom1P32958 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.48□□□□□ -0.89
Rom1P32958 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.48□□□□□ -0.89
Rom1P32958 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Rom1P32958 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Rom1P32958 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Rom1P32958 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Rom1P32958 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Rom1P32958 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Rom1P32958 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Rom1P32958 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.47□□□□□ -0.89
Rom1P32958 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.47□□□□□ -0.89
Rom1P32958 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Rom1P32958 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.47□□□□□ -0.89
Rom1P32958 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Rom1P32958 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.47□□□□□ -0.89
Rom1P32958 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.47□□□□□ -0.89
Rom1P32958 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms