Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vcam1P29533 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Vcam1P29533 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.76□□□□□ -0.21
Vcam1P29533 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.76□□□□□ -0.21
Vcam1P29533 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vcam1P29533 Gm11451-201ENSMUST00000118946 630 ntBASIC13.76□□□□□ -0.21
Vcam1P29533 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.76□□□□□ -0.21
Vcam1P29533 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.76□□□□□ -0.21
Vcam1P29533 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.76□□□□□ -0.21
Vcam1P29533 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Gm28388-201ENSMUST00000186262 437 ntBASIC13.76□□□□□ -0.21
Vcam1P29533 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.76□□□□□ -0.21
Vcam1P29533 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.76□□□□□ -0.21
Vcam1P29533 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.76□□□□□ -0.21
Vcam1P29533 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Vcam1P29533 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Vcam1P29533 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vcam1P29533 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vcam1P29533 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vcam1P29533 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vcam1P29533 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vcam1P29533 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Gm1848-201ENSMUST00000120711 789 ntBASIC13.75□□□□□ -0.21
Vcam1P29533 Mir1901-201ENSMUST00000122616 78 ntBASIC13.75□□□□□ -0.21
Vcam1P29533 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Gm10807-201ENSMUST00000177134 795 ntBASIC13.75□□□□□ -0.21
Vcam1P29533 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Vcam1P29533 Gm3551-201ENSMUST00000190750 664 ntBASIC13.75□□□□□ -0.21
Vcam1P29533 Gm34023-201ENSMUST00000195539 217 ntBASIC13.75□□□□□ -0.21
Vcam1P29533 Gm5982-201ENSMUST00000196234 512 ntBASIC13.75□□□□□ -0.21
Vcam1P29533 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vcam1P29533 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.75□□□□□ -0.21
Vcam1P29533 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Vcam1P29533 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.75□□□□□ -0.21
Vcam1P29533 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vcam1P29533 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.75□□□□□ -0.21
Vcam1P29533 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vcam1P29533 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.75□□□□□ -0.21
Vcam1P29533 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vcam1P29533 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Vcam1P29533 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Vcam1P29533 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.74□□□□□ -0.21
Vcam1P29533 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Vcam1P29533 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.74□□□□□ -0.21
Vcam1P29533 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.74□□□□□ -0.21
Vcam1P29533 Gm37905-201ENSMUST00000195310 341 ntBASIC13.74□□□□□ -0.21
Vcam1P29533 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.74□□□□□ -0.21
Vcam1P29533 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms