Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Ccl6P27784 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Ccl6P27784 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Gm23270-201ENSMUST00000104055 131 ntBASIC9.36□□□□□ -0.91
Ccl6P27784 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ccl6P27784 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Ccl6P27784 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.36□□□□□ -0.91
Ccl6P27784 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC9.36□□□□□ -0.91
Ccl6P27784 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.36□□□□□ -0.91
Ccl6P27784 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.36□□□□□ -0.91
Ccl6P27784 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC9.36□□□□□ -0.91
Ccl6P27784 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC9.36□□□□□ -0.91
Ccl6P27784 Gm45865-201ENSMUST00000211815 945 ntBASIC9.36□□□□□ -0.91
Ccl6P27784 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.36□□□□□ -0.91
Ccl6P27784 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.36□□□□□ -0.91
Ccl6P27784 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ccl6P27784 Olfr582-201ENSMUST00000098212 960 ntBASIC9.36□□□□□ -0.91
Ccl6P27784 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Ccl6P27784 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Ccl6P27784 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ccl6P27784 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC9.36□□□□□ -0.91
Ccl6P27784 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.36□□□□□ -0.91
Ccl6P27784 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ccl6P27784 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Ccl6P27784 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccl6P27784 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ccl6P27784 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.35□□□□□ -0.91
Ccl6P27784 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
Ccl6P27784 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.35□□□□□ -0.91
Ccl6P27784 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Ccl6P27784 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.35□□□□□ -0.91
Ccl6P27784 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.35□□□□□ -0.91
Ccl6P27784 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.35□□□□□ -0.91
Ccl6P27784 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.35□□□□□ -0.91
Ccl6P27784 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Ccl6P27784 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Ccl6P27784 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.35□□□□□ -0.91
Ccl6P27784 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Ccl6P27784 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccl6P27784 Gm31256-201ENSMUST00000194705 506 ntBASIC9.35□□□□□ -0.91
Ccl6P27784 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC9.35□□□□□ -0.91
Ccl6P27784 Gm8712-201ENSMUST00000221090 701 ntBASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms