Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Cd40lgP27548 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.15□□□□□ -0.62
Cd40lgP27548 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.15□□□□□ -0.62
Cd40lgP27548 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cd40lgP27548 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm26035-201ENSMUST00000083065 308 ntBASIC11.15□□□□□ -0.62
Cd40lgP27548 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.15□□□□□ -0.62
Cd40lgP27548 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cd40lgP27548 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cd40lgP27548 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.15□□□□□ -0.62
Cd40lgP27548 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Cd40lgP27548 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cd40lgP27548 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cd40lgP27548 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cd40lgP27548 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cd40lgP27548 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cd40lgP27548 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cd40lgP27548 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Cd40lgP27548 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.14□□□□□ -0.63
Cd40lgP27548 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cd40lgP27548 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Cd40lgP27548 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Gm25214-201ENSMUST00000104573 129 ntBASIC11.14□□□□□ -0.63
Cd40lgP27548 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.14□□□□□ -0.63
Cd40lgP27548 Gm9022-201ENSMUST00000182482 992 ntBASIC11.14□□□□□ -0.63
Cd40lgP27548 Gm13097-201ENSMUST00000210722 397 ntBASIC11.14□□□□□ -0.63
Cd40lgP27548 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.14□□□□□ -0.63
Cd40lgP27548 Gm9257-201ENSMUST00000221254 232 ntBASIC11.14□□□□□ -0.63
Cd40lgP27548 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.14□□□□□ -0.63
Cd40lgP27548 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.14□□□□□ -0.63
Cd40lgP27548 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cd40lgP27548 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Cd40lgP27548 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cd40lgP27548 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cd40lgP27548 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Cd40lgP27548 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.13□□□□□ -0.63
Cd40lgP27548 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Cd40lgP27548 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Cd40lgP27548 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Cd40lgP27548 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.13□□□□□ -0.63
Cd40lgP27548 Gm17376-201ENSMUST00000166016 84 ntBASIC11.13□□□□□ -0.63
Cd40lgP27548 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cd40lgP27548 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.13□□□□□ -0.63
Cd40lgP27548 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.13□□□□□ -0.63
Cd40lgP27548 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.13□□□□□ -0.63
Cd40lgP27548 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms