Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.15□□□□□ -0.63
Tnfrsf1bP25119 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfrsf1bP25119 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfrsf1bP25119 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Gm5419-201ENSMUST00000119301 527 ntBASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Gm15610-201ENSMUST00000120584 195 ntBASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Gm24749-201ENSMUST00000157838 343 ntBASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Gm2260-201ENSMUST00000184965 657 ntBASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Gm4607-201ENSMUST00000206649 577 ntBASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 AC124408.1-201ENSMUST00000228938 707 ntBASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.14□□□□□ -0.63
Tnfrsf1bP25119 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Gm22133-201ENSMUST00000102082 109 ntBASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Gm14208-201ENSMUST00000119645 678 ntBASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Gm14277-201ENSMUST00000121195 360 ntBASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 AY036118-201ENSMUST00000200021 923 ntBASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Gm17931-201ENSMUST00000208132 634 ntBASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Tnfrsf1bP25119 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Tnfrsf1bP25119 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms