Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cbx3P23198 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
Cbx3P23198 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Cbx3P23198 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cbx3P23198 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.94□□□□□ -0.66
Cbx3P23198 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cbx3P23198 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.94□□□□□ -0.66
Cbx3P23198 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.94□□□□□ -0.66
Cbx3P23198 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Cbx3P23198 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.94□□□□□ -0.66
Cbx3P23198 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.94□□□□□ -0.66
Cbx3P23198 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.94□□□□□ -0.66
Cbx3P23198 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Cbx3P23198 Gm9522-201ENSMUST00000182394 926 ntBASIC10.94□□□□□ -0.66
Cbx3P23198 Gm27838-201ENSMUST00000184829 128 ntBASIC10.94□□□□□ -0.66
Cbx3P23198 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.94□□□□□ -0.66
Cbx3P23198 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.94□□□□□ -0.66
Cbx3P23198 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cbx3P23198 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC10.94□□□□□ -0.66
Cbx3P23198 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.94□□□□□ -0.66
Cbx3P23198 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.94□□□□□ -0.66
Cbx3P23198 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cbx3P23198 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cbx3P23198 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cbx3P23198 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cbx3P23198 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cbx3P23198 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.93□□□□□ -0.66
Cbx3P23198 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.93□□□□□ -0.66
Cbx3P23198 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cbx3P23198 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cbx3P23198 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Cbx3P23198 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cbx3P23198 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cbx3P23198 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.93□□□□□ -0.66
Cbx3P23198 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.93□□□□□ -0.66
Cbx3P23198 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.93□□□□□ -0.66
Cbx3P23198 Gm27989-201ENSMUST00000184721 107 ntBASIC10.93□□□□□ -0.66
Cbx3P23198 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.93□□□□□ -0.66
Cbx3P23198 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.93□□□□□ -0.66
Cbx3P23198 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cbx3P23198 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.93□□□□□ -0.66
Cbx3P23198 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.93□□□□□ -0.66
Cbx3P23198 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cbx3P23198 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cbx3P23198 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.93□□□□□ -0.66
Cbx3P23198 CT009601.1-201ENSMUST00000225567 2705 ntBASIC10.93□□□□□ -0.66
Cbx3P23198 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cbx3P23198 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cbx3P23198 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.92□□□□□ -0.66
Cbx3P23198 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cbx3P23198 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cbx3P23198 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms