Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
BdnfP21237 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.57□□□□□ -0.56
BdnfP21237 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
BdnfP21237 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
BdnfP21237 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.56□□□□□ -0.56
BdnfP21237 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
BdnfP21237 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
BdnfP21237 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.56□□□□□ -0.56
BdnfP21237 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.56□□□□□ -0.56
BdnfP21237 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.56□□□□□ -0.56
BdnfP21237 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Gm5745-201ENSMUST00000183748 313 ntBASIC11.56□□□□□ -0.56
BdnfP21237 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.56□□□□□ -0.56
BdnfP21237 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.56□□□□□ -0.56
BdnfP21237 Gm45925-201ENSMUST00000218882 744 ntBASIC11.56□□□□□ -0.56
BdnfP21237 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.56□□□□□ -0.56
BdnfP21237 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.56□□□□□ -0.56
BdnfP21237 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
BdnfP21237 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
BdnfP21237 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.56□□□□□ -0.56
BdnfP21237 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
BdnfP21237 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
BdnfP21237 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.56□□□□□ -0.56
BdnfP21237 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.55□□□□□ -0.56
BdnfP21237 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.55□□□□□ -0.56
BdnfP21237 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
BdnfP21237 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.55□□□□□ -0.56
BdnfP21237 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
BdnfP21237 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
BdnfP21237 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
BdnfP21237 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
BdnfP21237 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.55□□□□□ -0.56
BdnfP21237 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
BdnfP21237 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Gm14660-201ENSMUST00000119809 575 ntBASIC11.55□□□□□ -0.56
BdnfP21237 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.55□□□□□ -0.56
BdnfP21237 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.55□□□□□ -0.56
BdnfP21237 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
BdnfP21237 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.55□□□□□ -0.56
BdnfP21237 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.55□□□□□ -0.56
BdnfP21237 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.55□□□□□ -0.56
BdnfP21237 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.55□□□□□ -0.56
BdnfP21237 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.55□□□□□ -0.56
BdnfP21237 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
BdnfP21237 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
BdnfP21237 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.55□□□□□ -0.56
BdnfP21237 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
BdnfP21237 Gm38359-201ENSMUST00000191884 2225 ntBASIC11.55□□□□□ -0.56
BdnfP21237 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
BdnfP21237 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms