Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.96□□□□□ -0.65
Hmgn1P18608 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.96□□□□□ -0.65
Hmgn1P18608 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.96□□□□□ -0.65
Hmgn1P18608 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Hmgn1P18608 Gm11591-201ENSMUST00000120063 702 ntBASIC10.96□□□□□ -0.65
Hmgn1P18608 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.96□□□□□ -0.65
Hmgn1P18608 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Hmgn1P18608 Rprl1-201ENSMUST00000158050 327 ntBASIC10.96□□□□□ -0.65
Hmgn1P18608 Gm37201-201ENSMUST00000191845 523 ntBASIC10.96□□□□□ -0.65
Hmgn1P18608 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.96□□□□□ -0.65
Hmgn1P18608 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Hmgn1P18608 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.96□□□□□ -0.65
Hmgn1P18608 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.96□□□□□ -0.65
Hmgn1P18608 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.96□□□□□ -0.65
Hmgn1P18608 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Hmgn1P18608 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Hmgn1P18608 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmgn1P18608 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn1P18608 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn1P18608 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn1P18608 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Hmgn1P18608 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn1P18608 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn1P18608 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn1P18608 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Hmgn1P18608 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.96□□□□□ -0.66
Hmgn1P18608 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.96□□□□□ -0.66
Hmgn1P18608 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Hmgn1P18608 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn1P18608 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Hmgn1P18608 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn1P18608 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn1P18608 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.95□□□□□ -0.66
Hmgn1P18608 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.95□□□□□ -0.66
Hmgn1P18608 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.95□□□□□ -0.66
Hmgn1P18608 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Gm12058-201ENSMUST00000118614 437 ntBASIC10.95□□□□□ -0.66
Hmgn1P18608 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.95□□□□□ -0.66
Hmgn1P18608 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Gm43002-201ENSMUST00000200310 155 ntBASIC10.95□□□□□ -0.66
Hmgn1P18608 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Gm17931-201ENSMUST00000208132 634 ntBASIC10.95□□□□□ -0.66
Hmgn1P18608 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.95□□□□□ -0.66
Hmgn1P18608 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.95□□□□□ -0.66
Hmgn1P18608 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.95□□□□□ -0.66
Hmgn1P18608 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.95□□□□□ -0.66
Hmgn1P18608 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn1P18608 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms