Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Cdx1P18111 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Cdx1P18111 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Gm18222-201ENSMUST00000202416 1387 ntBASIC9.75□□□□□ -0.85
Cdx1P18111 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cdx1P18111 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Cdx1P18111 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Cdx1P18111 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Cdx1P18111 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.74□□□□□ -0.85
Cdx1P18111 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.74□□□□□ -0.85
Cdx1P18111 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.74□□□□□ -0.85
Cdx1P18111 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Cdx1P18111 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.74□□□□□ -0.85
Cdx1P18111 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Gm8810-201ENSMUST00000172895 754 ntBASIC9.74□□□□□ -0.85
Cdx1P18111 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.74□□□□□ -0.85
Cdx1P18111 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.74□□□□□ -0.85
Cdx1P18111 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.74□□□□□ -0.85
Cdx1P18111 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Cdx1P18111 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Cdx1P18111 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.74□□□□□ -0.85
Cdx1P18111 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.74□□□□□ -0.85
Cdx1P18111 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC9.74□□□□□ -0.85
Cdx1P18111 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cdx1P18111 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC9.73□□□□□ -0.85
Cdx1P18111 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Cdx1P18111 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Cdx1P18111 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.73□□□□□ -0.85
Cdx1P18111 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Cdx1P18111 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Gm5940-201ENSMUST00000117582 1068 ntBASIC9.73□□□□□ -0.85
Cdx1P18111 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.73□□□□□ -0.85
Cdx1P18111 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Proscos-202ENSMUST00000178990 666 ntBASIC9.73□□□□□ -0.85
Cdx1P18111 Gm27331-201ENSMUST00000183705 60 ntBASIC9.73□□□□□ -0.85
Cdx1P18111 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC9.73□□□□□ -0.85
Cdx1P18111 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms