Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.23□□□□□ -0.45
Hmga1P17095 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 Gm24844-201ENSMUST00000158679 127 ntBASIC12.23□□□□□ -0.45
Hmga1P17095 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hmga1P17095 Gm28937-201ENSMUST00000185413 695 ntBASIC12.23□□□□□ -0.45
Hmga1P17095 Gm29400-201ENSMUST00000187208 695 ntBASIC12.23□□□□□ -0.45
Hmga1P17095 Gm28662-201ENSMUST00000188446 695 ntBASIC12.23□□□□□ -0.45
Hmga1P17095 Gm28251-201ENSMUST00000188835 695 ntBASIC12.23□□□□□ -0.45
Hmga1P17095 Gm37318-201ENSMUST00000194325 695 ntBASIC12.23□□□□□ -0.45
Hmga1P17095 Gm38017-201ENSMUST00000194768 695 ntBASIC12.23□□□□□ -0.45
Hmga1P17095 Gm37287-201ENSMUST00000195449 695 ntBASIC12.23□□□□□ -0.45
Hmga1P17095 Gm37793-201ENSMUST00000195548 695 ntBASIC12.23□□□□□ -0.45
Hmga1P17095 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 Gm45398-201ENSMUST00000210561 165 ntBASIC12.23□□□□□ -0.45
Hmga1P17095 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.23□□□□□ -0.45
Hmga1P17095 Gm7940-201ENSMUST00000218195 769 ntBASIC12.23□□□□□ -0.45
Hmga1P17095 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmga1P17095 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmga1P17095 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.23□□□□□ -0.45
Hmga1P17095 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.23□□□□□ -0.45
Hmga1P17095 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmga1P17095 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hmga1P17095 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmga1P17095 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Hmga1P17095 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Gm11783-201ENSMUST00000119549 885 ntBASIC12.22□□□□□ -0.45
Hmga1P17095 Gm11667-201ENSMUST00000119828 486 ntBASIC12.22□□□□□ -0.45
Hmga1P17095 Gm12029-201ENSMUST00000120073 832 ntBASIC12.22□□□□□ -0.45
Hmga1P17095 Gm14585-201ENSMUST00000120713 634 ntBASIC12.22□□□□□ -0.45
Hmga1P17095 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.22□□□□□ -0.45
Hmga1P17095 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.22□□□□□ -0.45
Hmga1P17095 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Gm18367-201ENSMUST00000176139 600 ntBASIC12.22□□□□□ -0.45
Hmga1P17095 Gm38151-201ENSMUST00000195085 289 ntBASIC12.22□□□□□ -0.45
Hmga1P17095 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.22□□□□□ -0.45
Hmga1P17095 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.22□□□□□ -0.45
Hmga1P17095 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Hmga1P17095 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hmga1P17095 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmga1P17095 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmga1P17095 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmga1P17095 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.21□□□□□ -0.45
Hmga1P17095 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmga1P17095 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmga1P17095 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms