Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col1a1P11087 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.92□□□□□ -0.18
Col1a1P11087 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.92□□□□□ -0.18
Col1a1P11087 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.92□□□□□ -0.18
Col1a1P11087 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Col1a1P11087 Gm9673-201ENSMUST00000119287 781 ntBASIC13.92□□□□□ -0.18
Col1a1P11087 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.92□□□□□ -0.18
Col1a1P11087 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.92□□□□□ -0.18
Col1a1P11087 Gm18776-201ENSMUST00000188833 654 ntBASIC13.92□□□□□ -0.18
Col1a1P11087 Gm6390-201ENSMUST00000215034 589 ntBASIC13.92□□□□□ -0.18
Col1a1P11087 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col1a1P11087 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col1a1P11087 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.92□□□□□ -0.18
Col1a1P11087 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col1a1P11087 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.92□□□□□ -0.18
Col1a1P11087 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.91□□□□□ -0.18
Col1a1P11087 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.91□□□□□ -0.18
Col1a1P11087 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Col1a1P11087 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.91□□□□□ -0.18
Col1a1P11087 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col1a1P11087 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.91□□□□□ -0.18
Col1a1P11087 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.91□□□□□ -0.18
Col1a1P11087 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col1a1P11087 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.91□□□□□ -0.18
Col1a1P11087 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.91□□□□□ -0.18
Col1a1P11087 Gm5982-201ENSMUST00000196234 512 ntBASIC13.91□□□□□ -0.18
Col1a1P11087 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.91□□□□□ -0.18
Col1a1P11087 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.91□□□□□ -0.18
Col1a1P11087 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col1a1P11087 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.91□□□□□ -0.18
Col1a1P11087 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.91□□□□□ -0.18
Col1a1P11087 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.91□□□□□ -0.18
Col1a1P11087 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.91□□□□□ -0.18
Col1a1P11087 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col1a1P11087 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.91□□□□□ -0.18
Col1a1P11087 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col1a1P11087 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.9□□□□□ -0.18
Col1a1P11087 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.9□□□□□ -0.18
Col1a1P11087 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.9□□□□□ -0.18
Col1a1P11087 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Col1a1P11087 Gm12247-201ENSMUST00000117585 670 ntBASIC13.9□□□□□ -0.18
Col1a1P11087 Gm12943-201ENSMUST00000119616 210 ntBASIC13.9□□□□□ -0.18
Col1a1P11087 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.9□□□□□ -0.18
Col1a1P11087 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.9□□□□□ -0.18
Col1a1P11087 Gm9081-201ENSMUST00000182346 991 ntBASIC13.9□□□□□ -0.18
Col1a1P11087 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col1a1P11087 Gm8197-202ENSMUST00000193422 934 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms