Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Ccl3P10855 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.59□□□□□ -0.71
Ccl3P10855 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Ccl3P10855 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.59□□□□□ -0.71
Ccl3P10855 Gm11783-201ENSMUST00000119549 885 ntBASIC10.59□□□□□ -0.71
Ccl3P10855 Gm14942-201ENSMUST00000119642 336 ntBASIC10.59□□□□□ -0.71
Ccl3P10855 Gm12628-201ENSMUST00000122193 382 ntBASIC10.59□□□□□ -0.71
Ccl3P10855 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.59□□□□□ -0.71
Ccl3P10855 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.59□□□□□ -0.71
Ccl3P10855 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 Gm6771-201ENSMUST00000182716 1001 ntBASIC10.59□□□□□ -0.71
Ccl3P10855 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.59□□□□□ -0.71
Ccl3P10855 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.59□□□□□ -0.71
Ccl3P10855 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.59□□□□□ -0.71
Ccl3P10855 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Ccl3P10855 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.59□□□□□ -0.71
Ccl3P10855 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.59□□□□□ -0.71
Ccl3P10855 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ccl3P10855 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccl3P10855 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.58□□□□□ -0.72
Ccl3P10855 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.58□□□□□ -0.72
Ccl3P10855 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Ccl3P10855 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Ccl3P10855 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.58□□□□□ -0.72
Ccl3P10855 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC10.58□□□□□ -0.72
Ccl3P10855 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.58□□□□□ -0.72
Ccl3P10855 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.58□□□□□ -0.72
Ccl3P10855 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Gm8531-201ENSMUST00000188319 893 ntBASIC10.58□□□□□ -0.72
Ccl3P10855 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Gm6450-201ENSMUST00000200896 574 ntBASIC10.58□□□□□ -0.72
Ccl3P10855 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 Gm44158-201ENSMUST00000203881 505 ntBASIC10.58□□□□□ -0.72
Ccl3P10855 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.58□□□□□ -0.72
Ccl3P10855 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Ccl3P10855 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Ccl3P10855 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Ccl3P10855 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccl3P10855 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccl3P10855 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccl3P10855 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccl3P10855 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Ccl3P10855 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Ccl3P10855 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ccl3P10855 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccl3P10855 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms