Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UbbP0CG49 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
UbbP0CG49 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
UbbP0CG49 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
UbbP0CG49 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
UbbP0CG49 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.46□□□□□ -0.73
UbbP0CG49 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.46□□□□□ -0.73
UbbP0CG49 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.46□□□□□ -0.73
UbbP0CG49 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
UbbP0CG49 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.46□□□□□ -0.73
UbbP0CG49 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UbbP0CG49 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
UbbP0CG49 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.46□□□□□ -0.73
UbbP0CG49 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
UbbP0CG49 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.46□□□□□ -0.74
UbbP0CG49 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
UbbP0CG49 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
UbbP0CG49 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UbbP0CG49 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.46□□□□□ -0.74
UbbP0CG49 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UbbP0CG49 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
UbbP0CG49 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.46□□□□□ -0.74
UbbP0CG49 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
UbbP0CG49 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
UbbP0CG49 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UbbP0CG49 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.46□□□□□ -0.74
UbbP0CG49 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
UbbP0CG49 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.46□□□□□ -0.74
UbbP0CG49 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UbbP0CG49 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UbbP0CG49 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
UbbP0CG49 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UbbP0CG49 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UbbP0CG49 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
UbbP0CG49 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.45□□□□□ -0.74
UbbP0CG49 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.45□□□□□ -0.74
UbbP0CG49 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.45□□□□□ -0.74
UbbP0CG49 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.45□□□□□ -0.74
UbbP0CG49 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
UbbP0CG49 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.45□□□□□ -0.74
UbbP0CG49 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.45□□□□□ -0.74
UbbP0CG49 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.45□□□□□ -0.74
UbbP0CG49 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Gm13342-201ENSMUST00000121055 207 ntBASIC10.45□□□□□ -0.74
UbbP0CG49 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.45□□□□□ -0.74
UbbP0CG49 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.45□□□□□ -0.74
UbbP0CG49 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.45□□□□□ -0.74
UbbP0CG49 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.45□□□□□ -0.74
UbbP0CG49 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.45□□□□□ -0.74
UbbP0CG49 Gm27023-201ENSMUST00000182372 285 ntBASIC10.45□□□□□ -0.74
UbbP0CG49 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.45□□□□□ -0.74
UbbP0CG49 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
UbbP0CG49 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.45□□□□□ -0.74
UbbP0CG49 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.45□□□□□ -0.74
UbbP0CG49 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.45□□□□□ -0.74
UbbP0CG49 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.45□□□□□ -0.74
UbbP0CG49 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.45□□□□□ -0.74
UbbP0CG49 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
UbbP0CG49 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms