Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Gm8956-201ENSMUST00000203939 825 ntBASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.37□□□□□ -0.75
Igh-VJ558P01758 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Gm9899-201ENSMUST00000065519 555 ntBASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Igh-VJ558P01758 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Gm26286-201ENSMUST00000104166 134 ntBASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Gm37259-201ENSMUST00000193903 849 ntBASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Gm38317-201ENSMUST00000195564 343 ntBASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Gm44364-201ENSMUST00000198368 141 ntBASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Gm43962-201ENSMUST00000203898 190 ntBASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Gm13097-201ENSMUST00000210722 397 ntBASIC10.36□□□□□ -0.75
Igh-VJ558P01758 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.36□□□□□ -0.75
Igh-VJ558P01758 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.36□□□□□ -0.75
Igh-VJ558P01758 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igh-VJ558P01758 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igh-VJ558P01758 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms