Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp1O89090 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.11□□□□□ -0.47
Sp1O89090 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp1O89090 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp1O89090 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sp1O89090 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp1O89090 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp1O89090 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp1O89090 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sp1O89090 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.11□□□□□ -0.47
Sp1O89090 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp1O89090 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Sp1O89090 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sp1O89090 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp1O89090 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sp1O89090 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Gm12579-201ENSMUST00000118040 783 ntBASIC12.1□□□□□ -0.47
Sp1O89090 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.1□□□□□ -0.47
Sp1O89090 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Sp1O89090 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.1□□□□□ -0.47
Sp1O89090 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.1□□□□□ -0.47
Sp1O89090 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.1□□□□□ -0.47
Sp1O89090 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Gm6450-201ENSMUST00000200896 574 ntBASIC12.1□□□□□ -0.47
Sp1O89090 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.1□□□□□ -0.47
Sp1O89090 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.1□□□□□ -0.47
Sp1O89090 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.1□□□□□ -0.47
Sp1O89090 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sp1O89090 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sp1O89090 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.1□□□□□ -0.47
Sp1O89090 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sp1O89090 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Sp1O89090 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sp1O89090 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sp1O89090 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp1O89090 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sp1O89090 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sp1O89090 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sp1O89090 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sp1O89090 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.09□□□□□ -0.47
Sp1O89090 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sp1O89090 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Sp1O89090 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Gm14263-201ENSMUST00000117955 746 ntBASIC12.09□□□□□ -0.47
Sp1O89090 Mir1943-201ENSMUST00000158276 73 ntBASIC12.09□□□□□ -0.47
Sp1O89090 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sp1O89090 Gm5523-201ENSMUST00000180415 997 ntBASIC12.09□□□□□ -0.47
Sp1O89090 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.09□□□□□ -0.47
Sp1O89090 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.09□□□□□ -0.47
Sp1O89090 Mir7686-201ENSMUST00000200604 57 ntBASIC12.09□□□□□ -0.47
Sp1O89090 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.09□□□□□ -0.47
Sp1O89090 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.09□□□□□ -0.47
Sp1O89090 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.09□□□□□ -0.47
Sp1O89090 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.09□□□□□ -0.47
Sp1O89090 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sp1O89090 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.09□□□□□ -0.47
Sp1O89090 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.09□□□□□ -0.47
Sp1O89090 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Sp1O89090 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Sp1O89090 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sp1O89090 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sp1O89090 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms