Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cops4O88544 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cops4O88544 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Cops4O88544 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cops4O88544 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Cops4O88544 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Cops4O88544 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Cops4O88544 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.08□□□□□ -0.64
Cops4O88544 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cops4O88544 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.08□□□□□ -0.64
Cops4O88544 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.08□□□□□ -0.64
Cops4O88544 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cops4O88544 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.08□□□□□ -0.64
Cops4O88544 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.08□□□□□ -0.64
Cops4O88544 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.08□□□□□ -0.64
Cops4O88544 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.08□□□□□ -0.64
Cops4O88544 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.08□□□□□ -0.64
Cops4O88544 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.08□□□□□ -0.64
Cops4O88544 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.08□□□□□ -0.64
Cops4O88544 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cops4O88544 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cops4O88544 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Cops4O88544 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cops4O88544 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Cops4O88544 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cops4O88544 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cops4O88544 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cops4O88544 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cops4O88544 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.07□□□□□ -0.64
Cops4O88544 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Cops4O88544 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cops4O88544 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Cops4O88544 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.07□□□□□ -0.64
Cops4O88544 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Cops4O88544 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Cops4O88544 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.07□□□□□ -0.64
Cops4O88544 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Cops4O88544 Gm12036-201ENSMUST00000120008 530 ntBASIC11.07□□□□□ -0.64
Cops4O88544 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.07□□□□□ -0.64
Cops4O88544 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.07□□□□□ -0.64
Cops4O88544 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Cops4O88544 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.07□□□□□ -0.64
Cops4O88544 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.07□□□□□ -0.64
Cops4O88544 Gm7653-201ENSMUST00000214567 508 ntBASIC11.07□□□□□ -0.64
Cops4O88544 Gm5035-201ENSMUST00000215581 927 ntBASIC11.07□□□□□ -0.64
Cops4O88544 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Gm24526-201ENSMUST00000082921 158 ntBASIC11.07□□□□□ -0.64
Cops4O88544 Gm6091-201ENSMUST00000098307 165 ntBASIC11.07□□□□□ -0.64
Cops4O88544 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.07□□□□□ -0.64
Cops4O88544 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
Cops4O88544 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cops4O88544 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.07□□□□□ -0.64
Cops4O88544 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms