Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.22□□□□□ -0.29
Trdmt1O55055 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trdmt1O55055 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.21□□□□□ -0.29
Trdmt1O55055 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.21□□□□□ -0.29
Trdmt1O55055 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Trdmt1O55055 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.21□□□□□ -0.29
Trdmt1O55055 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.21□□□□□ -0.29
Trdmt1O55055 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.21□□□□□ -0.29
Trdmt1O55055 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trdmt1O55055 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trdmt1O55055 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.21□□□□□ -0.29
Trdmt1O55055 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.21□□□□□ -0.29
Trdmt1O55055 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.21□□□□□ -0.29
Trdmt1O55055 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trdmt1O55055 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gm44158-201ENSMUST00000203881 505 ntBASIC13.21□□□□□ -0.29
Trdmt1O55055 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gm7940-201ENSMUST00000218195 769 ntBASIC13.21□□□□□ -0.29
Trdmt1O55055 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.21□□□□□ -0.29
Trdmt1O55055 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.21□□□□□ -0.29
Trdmt1O55055 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trdmt1O55055 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trdmt1O55055 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trdmt1O55055 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdmt1O55055 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Trdmt1O55055 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdmt1O55055 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdmt1O55055 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trdmt1O55055 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trdmt1O55055 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdmt1O55055 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trdmt1O55055 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trdmt1O55055 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.2□□□□□ -0.3
Trdmt1O55055 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trdmt1O55055 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.2□□□□□ -0.3
Trdmt1O55055 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trdmt1O55055 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trdmt1O55055 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.2□□□□□ -0.3
Trdmt1O55055 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.2□□□□□ -0.3
Trdmt1O55055 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trdmt1O55055 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trdmt1O55055 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.2□□□□□ -0.3
Trdmt1O55055 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.2□□□□□ -0.3
Trdmt1O55055 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.2□□□□□ -0.3
Trdmt1O55055 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.2□□□□□ -0.3
Trdmt1O55055 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trdmt1O55055 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trdmt1O55055 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trdmt1O55055 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trdmt1O55055 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdmt1O55055 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.19□□□□□ -0.3
Trdmt1O55055 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.19□□□□□ -0.3
Trdmt1O55055 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms