Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf13O54965 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rnf13O54965 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf13O54965 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf13O54965 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf13O54965 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rnf13O54965 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.87□□□□□ -0.67
Rnf13O54965 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.87□□□□□ -0.67
Rnf13O54965 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.87□□□□□ -0.67
Rnf13O54965 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rnf13O54965 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Rnf13O54965 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf13O54965 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Gm23912-201ENSMUST00000104687 87 ntBASIC10.87□□□□□ -0.67
Rnf13O54965 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf13O54965 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Gm4984-201ENSMUST00000115987 360 ntBASIC10.87□□□□□ -0.67
Rnf13O54965 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.87□□□□□ -0.67
Rnf13O54965 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.87□□□□□ -0.67
Rnf13O54965 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.87□□□□□ -0.67
Rnf13O54965 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.87□□□□□ -0.67
Rnf13O54965 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.87□□□□□ -0.67
Rnf13O54965 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.87□□□□□ -0.67
Rnf13O54965 Gm40466-201ENSMUST00000212174 422 ntBASIC10.87□□□□□ -0.67
Rnf13O54965 Gm7653-201ENSMUST00000214567 508 ntBASIC10.87□□□□□ -0.67
Rnf13O54965 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.87□□□□□ -0.67
Rnf13O54965 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rnf13O54965 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rnf13O54965 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf13O54965 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.86□□□□□ -0.67
Rnf13O54965 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.86□□□□□ -0.67
Rnf13O54965 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Gm11591-201ENSMUST00000120063 702 ntBASIC10.86□□□□□ -0.67
Rnf13O54965 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.86□□□□□ -0.67
Rnf13O54965 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Rnf13O54965 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.86□□□□□ -0.67
Rnf13O54965 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Gm29127-201ENSMUST00000188304 517 ntBASIC10.86□□□□□ -0.67
Rnf13O54965 Gm9136-201ENSMUST00000193368 454 ntBASIC10.86□□□□□ -0.67
Rnf13O54965 Gm42937-201ENSMUST00000197360 752 ntBASIC10.86□□□□□ -0.67
Rnf13O54965 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.86□□□□□ -0.67
Rnf13O54965 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.86□□□□□ -0.67
Rnf13O54965 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.86□□□□□ -0.67
Rnf13O54965 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rnf13O54965 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf13O54965 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms