Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Alx4O35137 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Alx4O35137 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Alx4O35137 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Alx4O35137 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Alx4O35137 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Alx4O35137 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Alx4O35137 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.73□□□□□ -0.69
Alx4O35137 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Alx4O35137 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 BC043934-202ENSMUST00000185694 2356 ntBASIC10.72□□□□□ -0.69
Alx4O35137 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Gm7809-201ENSMUST00000153199 742 ntBASIC10.72□□□□□ -0.69
Alx4O35137 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.72□□□□□ -0.69
Alx4O35137 Gm16379-201ENSMUST00000161469 348 ntBASIC10.72□□□□□ -0.69
Alx4O35137 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Alx4O35137 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Alx4O35137 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.72□□□□□ -0.69
Alx4O35137 Gm3890-201ENSMUST00000182416 207 ntBASIC10.72□□□□□ -0.69
Alx4O35137 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Gm29127-201ENSMUST00000188304 517 ntBASIC10.72□□□□□ -0.69
Alx4O35137 Gm37201-201ENSMUST00000191845 523 ntBASIC10.72□□□□□ -0.69
Alx4O35137 Gm8762-201ENSMUST00000193486 339 ntBASIC10.72□□□□□ -0.69
Alx4O35137 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.72□□□□□ -0.69
Alx4O35137 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Alx4O35137 Snora73a-201ENSMUST00000082453 205 ntBASIC10.72□□□□□ -0.69
Alx4O35137 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Alx4O35137 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.72□□□□□ -0.69
Alx4O35137 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.72□□□□□ -0.69
Alx4O35137 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Alx4O35137 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.71□□□□□ -0.69
Alx4O35137 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
Alx4O35137 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Alx4O35137 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.71□□□□□ -0.69
Alx4O35137 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.71□□□□□ -0.69
Alx4O35137 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.71□□□□□ -0.69
Alx4O35137 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.71□□□□□ -0.69
Alx4O35137 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Alx4O35137 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.71□□□□□ -0.69
Alx4O35137 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.71□□□□□ -0.69
Alx4O35137 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.71□□□□□ -0.69
Alx4O35137 Gm43002-201ENSMUST00000200310 155 ntBASIC10.71□□□□□ -0.69
Alx4O35137 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.71□□□□□ -0.69
Alx4O35137 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.71□□□□□ -0.69
Alx4O35137 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.71□□□□□ -0.69
Alx4O35137 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.71□□□□□ -0.69
Alx4O35137 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.71□□□□□ -0.69
Alx4O35137 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Alx4O35137 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Alx4O35137 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Alx4O35137 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Alx4O35137 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Alx4O35137 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.71□□□□□ -0.7
Alx4O35137 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Alx4O35137 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Alx4O35137 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Alx4O35137 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Alx4O35137 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Alx4O35137 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Alx4O35137 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms