Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Polr1aO35134 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Polr1aO35134 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Polr1aO35134 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC18.14■□□□□ 0.5
Polr1aO35134 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC18.14■□□□□ 0.5
Polr1aO35134 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Polr1aO35134 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Polr1aO35134 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Polr1aO35134 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Polr1aO35134 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Polr1aO35134 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Polr1aO35134 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Polr1aO35134 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Polr1aO35134 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Polr1aO35134 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Polr1aO35134 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Polr1aO35134 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Polr1aO35134 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Polr1aO35134 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Polr1aO35134 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Polr1aO35134 Gm13284-201ENSMUST00000121020 547 ntBASIC18.14■□□□□ 0.49
Polr1aO35134 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC18.14■□□□□ 0.49
Polr1aO35134 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC18.14■□□□□ 0.49
Polr1aO35134 Gm22146-201ENSMUST00000157397 288 ntBASIC18.14■□□□□ 0.49
Polr1aO35134 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC18.14■□□□□ 0.49
Polr1aO35134 Gm37284-201ENSMUST00000193607 539 ntBASIC18.14■□□□□ 0.49
Polr1aO35134 Gm44323-201ENSMUST00000198689 129 ntBASIC18.14■□□□□ 0.49
Polr1aO35134 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC18.14■□□□□ 0.49
Polr1aO35134 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Polr1aO35134 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Polr1aO35134 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Polr1aO35134 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Polr1aO35134 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Polr1aO35134 Gm37644-201ENSMUST00000192190 2270 ntBASIC18.13■□□□□ 0.49
Polr1aO35134 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC18.13■□□□□ 0.49
Polr1aO35134 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Polr1aO35134 Gm6653-201ENSMUST00000218063 1288 ntBASIC18.13■□□□□ 0.49
Polr1aO35134 AC154361.2-201ENSMUST00000224747 943 ntBASIC18.13■□□□□ 0.49
Polr1aO35134 Arhgef33-207ENSMUST00000224966 490 ntBASIC18.13■□□□□ 0.49
Polr1aO35134 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Polr1aO35134 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Polr1aO35134 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Polr1aO35134 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Polr1aO35134 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Polr1aO35134 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC18.13■□□□□ 0.49
Polr1aO35134 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Polr1aO35134 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Polr1aO35134 Gm5434-202ENSMUST00000222384 1451 ntBASIC18.13■□□□□ 0.49
Polr1aO35134 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Polr1aO35134 Gm5434-201ENSMUST00000071825 1451 ntBASIC18.13■□□□□ 0.49
Polr1aO35134 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Polr1aO35134 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Polr1aO35134 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Polr1aO35134 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Polr1aO35134 Gm10728-201ENSMUST00000194292 1829 ntBASIC18.12■□□□□ 0.49
Polr1aO35134 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC18.12■□□□□ 0.49
Polr1aO35134 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC18.12■□□□□ 0.49
Polr1aO35134 Gm8111-201ENSMUST00000117659 987 ntBASIC18.12■□□□□ 0.49
Polr1aO35134 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC18.12■□□□□ 0.49
Polr1aO35134 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Polr1aO35134 Gm29067-201ENSMUST00000190821 470 ntBASIC18.12■□□□□ 0.49
Polr1aO35134 Gm34379-201ENSMUST00000195036 290 ntBASIC18.12■□□□□ 0.49
Polr1aO35134 Gm7902-201ENSMUST00000198842 947 ntBASIC18.12■□□□□ 0.49
Polr1aO35134 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC18.12■□□□□ 0.49
Polr1aO35134 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC18.12■□□□□ 0.49
Polr1aO35134 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Polr1aO35134 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Polr1aO35134 Gm15197-201ENSMUST00000120526 478 ntBASIC18.12■□□□□ 0.49
Polr1aO35134 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC18.12■□□□□ 0.49
Polr1aO35134 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC18.12■□□□□ 0.49
Polr1aO35134 Gm18035-201ENSMUST00000211962 589 ntBASIC18.12■□□□□ 0.49
Polr1aO35134 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Gm40879-201ENSMUST00000220759 612 ntBASIC18.12■□□□□ 0.49
Polr1aO35134 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Polr1aO35134 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC18.11■□□□□ 0.49
Polr1aO35134 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Polr1aO35134 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC18.11■□□□□ 0.49
Polr1aO35134 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms