Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.26□□□□□ -0.13
Hdac1O09106 Gm6266-201ENSMUST00000203844 806 ntBASIC14.26□□□□□ -0.13
Hdac1O09106 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Hdac1O09106 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac1O09106 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.26□□□□□ -0.13
Hdac1O09106 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac1O09106 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac1O09106 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac1O09106 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac1O09106 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac1O09106 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac1O09106 BC043934-202ENSMUST00000185694 2356 ntBASIC14.26□□□□□ -0.13
Hdac1O09106 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac1O09106 AC122811.1-201ENSMUST00000222257 2921 ntBASIC14.26□□□□□ -0.13
Hdac1O09106 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac1O09106 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Hdac1O09106 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac1O09106 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.25□□□□□ -0.13
Hdac1O09106 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Gm7722-201ENSMUST00000120646 741 ntBASIC14.25□□□□□ -0.13
Hdac1O09106 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hdac1O09106 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.25□□□□□ -0.13
Hdac1O09106 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hdac1O09106 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.25□□□□□ -0.13
Hdac1O09106 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.25□□□□□ -0.13
Hdac1O09106 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.25□□□□□ -0.13
Hdac1O09106 Lect2-202ENSMUST00000225183 823 ntBASIC14.25□□□□□ -0.13
Hdac1O09106 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Hdac1O09106 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hdac1O09106 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.25□□□□□ -0.13
Hdac1O09106 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC14.25□□□□□ -0.13
Hdac1O09106 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac1O09106 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.24□□□□□ -0.13
Hdac1O09106 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hdac1O09106 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.24□□□□□ -0.13
Hdac1O09106 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hdac1O09106 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Hdac1O09106 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hdac1O09106 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.24□□□□□ -0.13
Hdac1O09106 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.24□□□□□ -0.13
Hdac1O09106 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hdac1O09106 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.24□□□□□ -0.13
Hdac1O09106 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Hdac1O09106 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hdac1O09106 Gm27514-201ENSMUST00000183692 110 ntBASIC14.24□□□□□ -0.13
Hdac1O09106 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.24□□□□□ -0.13
Hdac1O09106 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Gm5950-201ENSMUST00000213337 772 ntBASIC14.24□□□□□ -0.13
Hdac1O09106 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Gm10254-201ENSMUST00000052888 867 ntBASIC14.24□□□□□ -0.13
Hdac1O09106 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac1O09106 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hdac1O09106 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Hdac1O09106 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hdac1O09106 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms