Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Usp35M0QWN7 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp35M0QWN7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp35M0QWN7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp35M0QWN7 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.98□□□□□ -0.33
Usp35M0QWN7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.98□□□□□ -0.33
Usp35M0QWN7 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.98□□□□□ -0.33
Usp35M0QWN7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.98□□□□□ -0.33
Usp35M0QWN7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.98□□□□□ -0.33
Usp35M0QWN7 AU022133-201ENSMUST00000200601 873 ntBASIC12.98□□□□□ -0.33
Usp35M0QWN7 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.98□□□□□ -0.33
Usp35M0QWN7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp35M0QWN7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.98□□□□□ -0.33
Usp35M0QWN7 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.98□□□□□ -0.33
Usp35M0QWN7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.97□□□□□ -0.33
Usp35M0QWN7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Gm23200-201ENSMUST00000104379 132 ntBASIC12.97□□□□□ -0.33
Usp35M0QWN7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Gm9083-201ENSMUST00000120423 819 ntBASIC12.97□□□□□ -0.33
Usp35M0QWN7 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.97□□□□□ -0.33
Usp35M0QWN7 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Gm24749-201ENSMUST00000157838 343 ntBASIC12.97□□□□□ -0.33
Usp35M0QWN7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Gm17812-201ENSMUST00000204935 318 ntBASIC12.97□□□□□ -0.33
Usp35M0QWN7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp35M0QWN7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp35M0QWN7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp35M0QWN7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp35M0QWN7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp35M0QWN7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp35M0QWN7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Usp35M0QWN7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.96□□□□□ -0.33
Usp35M0QWN7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Usp35M0QWN7 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms