Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
B020004C17RikJ3QP07 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
B020004C17RikJ3QP07 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
B020004C17RikJ3QP07 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.39□□□□□ -0.27
B020004C17RikJ3QP07 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
B020004C17RikJ3QP07 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.39□□□□□ -0.27
B020004C17RikJ3QP07 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
B020004C17RikJ3QP07 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
B020004C17RikJ3QP07 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
B020004C17RikJ3QP07 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
B020004C17RikJ3QP07 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
B020004C17RikJ3QP07 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Gm12036-201ENSMUST00000120008 530 ntBASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Mir8093-201ENSMUST00000185043 137 ntBASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Gm9111-201ENSMUST00000219394 709 ntBASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Gm23105-201ENSMUST00000083719 134 ntBASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Mir483-201ENSMUST00000093631 73 ntBASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
B020004C17RikJ3QP07 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Gm5982-201ENSMUST00000196234 512 ntBASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Gm3726-201ENSMUST00000203110 785 ntBASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Gm18059-201ENSMUST00000208073 580 ntBASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
B020004C17RikJ3QP07 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms