Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc149F6V035 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc149F6V035 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.22□□□□□ -0.45
Ccdc149F6V035 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Gm15004-201ENSMUST00000119192 630 ntBASIC12.22□□□□□ -0.45
Ccdc149F6V035 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.22□□□□□ -0.45
Ccdc149F6V035 Gm8815-201ENSMUST00000173809 620 ntBASIC12.22□□□□□ -0.45
Ccdc149F6V035 Gm5706-201ENSMUST00000181525 993 ntBASIC12.22□□□□□ -0.45
Ccdc149F6V035 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Gm19287-201ENSMUST00000203190 358 ntBASIC12.22□□□□□ -0.45
Ccdc149F6V035 Gm43916-201ENSMUST00000205062 967 ntBASIC12.22□□□□□ -0.45
Ccdc149F6V035 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.22□□□□□ -0.45
Ccdc149F6V035 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.22□□□□□ -0.45
Ccdc149F6V035 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.22□□□□□ -0.45
Ccdc149F6V035 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc149F6V035 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc149F6V035 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Gm45575-201ENSMUST00000210283 548 ntBASIC12.21□□□□□ -0.45
Ccdc149F6V035 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.21□□□□□ -0.45
Ccdc149F6V035 Gm10179-201ENSMUST00000086233 688 ntBASIC12.21□□□□□ -0.45
Ccdc149F6V035 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc149F6V035 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Ccdc149F6V035 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms