Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd2E9PZM4 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd2E9PZM4 Gm8019-201ENSMUST00000119317 587 ntBASIC16.08■□□□□ 0.17
Chd2E9PZM4 Gm14113-201ENSMUST00000121399 976 ntBASIC16.08■□□□□ 0.17
Chd2E9PZM4 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chd2E9PZM4 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chd2E9PZM4 Mir6953-201ENSMUST00000184745 68 ntBASIC16.08■□□□□ 0.17
Chd2E9PZM4 Ighv5-8-202ENSMUST00000191967 337 ntBASIC16.08■□□□□ 0.17
Chd2E9PZM4 Gm18123-201ENSMUST00000210874 822 ntBASIC16.08■□□□□ 0.17
Chd2E9PZM4 AC134537.1-201ENSMUST00000219205 265 ntBASIC16.08■□□□□ 0.17
Chd2E9PZM4 AC129975.1-201ENSMUST00000224816 592 ntBASIC16.08■□□□□ 0.17
Chd2E9PZM4 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd2E9PZM4 Gm25580-201ENSMUST00000083409 327 ntBASIC16.08■□□□□ 0.17
Chd2E9PZM4 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd2E9PZM4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd2E9PZM4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Gm18733-202ENSMUST00000174447 401 ntBASIC16.08■□□□□ 0.16
Chd2E9PZM4 Gm8234-201ENSMUST00000198523 1107 ntBASIC16.08■□□□□ 0.16
Chd2E9PZM4 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd2E9PZM4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Gm7002-201ENSMUST00000221386 2165 ntBASIC16.07■□□□□ 0.16
Chd2E9PZM4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC16.07■□□□□ 0.16
Chd2E9PZM4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Gm23604-201ENSMUST00000104311 132 ntBASIC16.07■□□□□ 0.16
Chd2E9PZM4 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Olfml3-204ENSMUST00000169286 874 ntBASIC16.07■□□□□ 0.16
Chd2E9PZM4 Gm29304-201ENSMUST00000186555 695 ntBASIC16.07■□□□□ 0.16
Chd2E9PZM4 Gm29223-201ENSMUST00000188867 695 ntBASIC16.07■□□□□ 0.16
Chd2E9PZM4 Gm37921-201ENSMUST00000194333 695 ntBASIC16.07■□□□□ 0.16
Chd2E9PZM4 Gm43547-201ENSMUST00000197729 328 ntBASIC16.07■□□□□ 0.16
Chd2E9PZM4 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Gm28424-201ENSMUST00000187393 1319 ntBASIC16.07■□□□□ 0.16
Chd2E9PZM4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC16.07■□□□□ 0.16
Chd2E9PZM4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd2E9PZM4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Gm8152-201ENSMUST00000120842 637 ntBASIC16.06■□□□□ 0.16
Chd2E9PZM4 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Gm19927-201ENSMUST00000185792 781 ntBASIC16.06■□□□□ 0.16
Chd2E9PZM4 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC16.06■□□□□ 0.16
Chd2E9PZM4 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC16.06■□□□□ 0.16
Chd2E9PZM4 AC122024.3-201ENSMUST00000217719 294 ntBASIC16.06■□□□□ 0.16
Chd2E9PZM4 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Gm9915-201ENSMUST00000066196 1383 ntBASIC16.06■□□□□ 0.16
Chd2E9PZM4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd2E9PZM4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms