Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Gm19459-201ENSMUST00000176240 835 ntBASIC11.88□□□□□ -0.51
Srp54bE9PXC0 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Gm9797-202ENSMUST00000218003 294 ntBASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Srp54bE9PXC0 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Gm11663-201ENSMUST00000117888 290 ntBASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Gm5419-201ENSMUST00000119301 527 ntBASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Gm13461-201ENSMUST00000120980 662 ntBASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Gm8199-201ENSMUST00000121323 823 ntBASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.87□□□□□ -0.51
Srp54bE9PXC0 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.87□□□□□ -0.51
Srp54bE9PXC0 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.87□□□□□ -0.51
Srp54bE9PXC0 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Map1b-203ENSMUST00000223725 2669 ntBASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Srp54bE9PXC0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Srp54bE9PXC0 Gm13809-201ENSMUST00000117921 597 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms