Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Gm8018-201ENSMUST00000173536 789 ntBASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 BC043934-202ENSMUST00000185694 2356 ntBASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm28043E0CXC2 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Gm17420-201ENSMUST00000164753 153 ntBASIC12.07□□□□□ -0.48
Gm28043E0CXC2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Gm22058-201ENSMUST00000083393 310 ntBASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm28043E0CXC2 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm28043E0CXC2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms