Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm24328-201ENSMUST00000175104 67 ntBASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm25998-201ENSMUST00000175397 53 ntBASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm23576-201ENSMUST00000179918 110 ntBASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Gm26670-202ENSMUST00000226862 340 ntBASIC16.62■□□□□ 0.25
Hfm1D3Z4R1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Gm11957-201ENSMUST00000118304 779 ntBASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Gm14234-201ENSMUST00000119539 845 ntBASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Gm25830-201ENSMUST00000158923 132 ntBASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Gm26976-201ENSMUST00000182929 908 ntBASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Trav11n-201ENSMUST00000200113 343 ntBASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 AC154305.2-201ENSMUST00000225813 901 ntBASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Hfm1D3Z4R1 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Gm38385-201ENSMUST00000194454 2351 ntBASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Gm8522-201ENSMUST00000118416 1929 ntBASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Gm6831-202ENSMUST00000213025 1673 ntBASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Gm14497-201ENSMUST00000119537 580 ntBASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Mir7051-201ENSMUST00000184167 73 ntBASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Ighv1-2-201ENSMUST00000195325 378 ntBASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hfm1D3Z4R1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Gm37600-201ENSMUST00000193764 3292 ntBASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hfm1D3Z4R1 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms