Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tmf1B9EKI3 Cog3-203ENSMUST00000227473 4197 ntBASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Gm11663-201ENSMUST00000117888 290 ntBASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Gm23085-201ENSMUST00000157849 293 ntBASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Gm2553-201ENSMUST00000215986 605 ntBASIC16.23■□□□□ 0.19
Tmf1B9EKI3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Gm6580-201ENSMUST00000117504 1357 ntBASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tmf1B9EKI3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Nupl1-206ENSMUST00000225111 2936 ntBASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Gm7851-201ENSMUST00000117574 323 ntBASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Gm11941-201ENSMUST00000119904 610 ntBASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Gm38117-201ENSMUST00000194653 939 ntBASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Gm42682-201ENSMUST00000198349 1265 ntBASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tmf1B9EKI3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Gm6114-201ENSMUST00000182472 968 ntBASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Gm10288-201ENSMUST00000084614 537 ntBASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tmf1B9EKI3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Tmf1B9EKI3 Gm42480-201ENSMUST00000198434 2595 ntBASIC16.21■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms