Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brpf3B2KF05 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Brpf3B2KF05 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brpf3B2KF05 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Brpf3B2KF05 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brpf3B2KF05 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brpf3B2KF05 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.31□□□□□ -0.28
Brpf3B2KF05 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.31□□□□□ -0.28
Brpf3B2KF05 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.31□□□□□ -0.28
Brpf3B2KF05 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.31□□□□□ -0.28
Brpf3B2KF05 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.31□□□□□ -0.28
Brpf3B2KF05 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Gm5706-201ENSMUST00000181525 993 ntBASIC13.31□□□□□ -0.28
Brpf3B2KF05 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.31□□□□□ -0.28
Brpf3B2KF05 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brpf3B2KF05 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Gm23912-201ENSMUST00000104687 87 ntBASIC13.3□□□□□ -0.28
Brpf3B2KF05 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Gm24644-201ENSMUST00000157114 139 ntBASIC13.3□□□□□ -0.28
Brpf3B2KF05 Gm23984-201ENSMUST00000157139 203 ntBASIC13.3□□□□□ -0.28
Brpf3B2KF05 Gm8738-201ENSMUST00000172606 329 ntBASIC13.3□□□□□ -0.28
Brpf3B2KF05 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Gm43002-201ENSMUST00000200310 155 ntBASIC13.3□□□□□ -0.28
Brpf3B2KF05 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Gm43522-201ENSMUST00000196697 1922 ntBASIC13.3□□□□□ -0.28
Brpf3B2KF05 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.3□□□□□ -0.28
Brpf3B2KF05 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.3□□□□□ -0.28
Brpf3B2KF05 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.3□□□□□ -0.28
Brpf3B2KF05 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.3□□□□□ -0.28
Brpf3B2KF05 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
Brpf3B2KF05 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms