Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.53□□□□□ -0.4
Scn1aA2APX8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.53□□□□□ -0.4
Scn1aA2APX8 Gm15432-201ENSMUST00000121106 195 ntBASIC12.53□□□□□ -0.4
Scn1aA2APX8 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.53□□□□□ -0.4
Scn1aA2APX8 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.53□□□□□ -0.4
Scn1aA2APX8 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.53□□□□□ -0.4
Scn1aA2APX8 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.53□□□□□ -0.4
Scn1aA2APX8 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.53□□□□□ -0.4
Scn1aA2APX8 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.53□□□□□ -0.4
Scn1aA2APX8 Lect2-202ENSMUST00000225183 823 ntBASIC12.53□□□□□ -0.4
Scn1aA2APX8 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn1aA2APX8 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Scn1aA2APX8 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Gm19459-201ENSMUST00000176240 835 ntBASIC12.52□□□□□ -0.4
Scn1aA2APX8 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1aA2APX8 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Scn1aA2APX8 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm10807-201ENSMUST00000177134 795 ntBASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm5982-201ENSMUST00000196234 512 ntBASIC12.52□□□□□ -0.41
Scn1aA2APX8 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.52□□□□□ -0.41
Scn1aA2APX8 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.52□□□□□ -0.41
Scn1aA2APX8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn1aA2APX8 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.51□□□□□ -0.41
Scn1aA2APX8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1aA2APX8 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms