Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gabrb3-206ENSMUST00000196198 4348 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm45428-201ENSMUST00000209619 1789 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm13437-201ENSMUST00000122434 1981 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm37233-201ENSMUST00000192173 6263 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm6226-201ENSMUST00000117765 1146 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm6539-201ENSMUST00000119157 1064 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm11557-201ENSMUST00000120200 1008 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm25948-201ENSMUST00000175334 112 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm8927-201ENSMUST00000181978 981 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm5177-201ENSMUST00000183092 997 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm2272-201ENSMUST00000194903 582 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 AC108846.1-201ENSMUST00000214531 513 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm3222-201ENSMUST00000071282 990 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Dock7-201ENSMUST00000030286 7127 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Abcc8-201ENSMUST00000033123 4877 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Gm3880A0A1B0GSB3 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm43760-201ENSMUST00000202120 3015 ntBASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm5366-201ENSMUST00000215494 1338 ntBASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Nkiras1-202ENSMUST00000132374 4598 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Gm3880A0A1B0GSB3 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms