Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm14208-201ENSMUST00000119645 678 ntBASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm14999-201ENSMUST00000121039 624 ntBASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm8385-201ENSMUST00000058999 643 ntBASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Mrpl40Q9Z2Q5 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm16296-201ENSMUST00000159905 325 ntBASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Mir6927-201ENSMUST00000184494 71 ntBASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm27390-201ENSMUST00000184516 176 ntBASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Gzmn-202ENSMUST00000225535 989 ntBASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Mrpl40Q9Z2Q5 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mrpl40Q9Z2Q5 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Mrpl40Q9Z2Q5 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mrpl40Q9Z2Q5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Mrpl40Q9Z2Q5 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mrpl40Q9Z2Q5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Mrpl40Q9Z2Q5 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mrpl40Q9Z2Q5 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Mrpl40Q9Z2Q5 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mrpl40Q9Z2Q5 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.11□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.11□□□□□ -0.47
Mrpl40Q9Z2Q5 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Mrpl40Q9Z2Q5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Mrpl40Q9Z2Q5 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms