Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm11989-201ENSMUST00000117240 672 ntBASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm11362-201ENSMUST00000118838 850 ntBASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm7722-201ENSMUST00000120646 741 ntBASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm27516-201ENSMUST00000184237 98 ntBASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm38241-201ENSMUST00000192641 898 ntBASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldn9Q9Z0S7 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Gm12164-201ENSMUST00000121695 551 ntBASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cldn9Q9Z0S7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldn9Q9Z0S7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cldn9Q9Z0S7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cldn9Q9Z0S7 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.55□□□□□ -0.56
Cldn9Q9Z0S7 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cldn9Q9Z0S7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms