Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Gm28450-201ENSMUST00000187349 638 ntBASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Gm5363-201ENSMUST00000211927 938 ntBASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Phtf1Q9QZ09 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Gm18038-201ENSMUST00000197900 485 ntBASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 AU022133-201ENSMUST00000200601 873 ntBASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Gm5705-201ENSMUST00000066241 711 ntBASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Phtf1Q9QZ09 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Gm15515-201ENSMUST00000117827 822 ntBASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Gm4909-201ENSMUST00000118749 794 ntBASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Gm17040-202ENSMUST00000170597 889 ntBASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Gm3332-201ENSMUST00000189337 928 ntBASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Gm9797-202ENSMUST00000218003 294 ntBASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Phtf1Q9QZ09 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phtf1Q9QZ09 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phtf1Q9QZ09 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Phtf1Q9QZ09 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Phtf1Q9QZ09 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms