Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Gm23596-201ENSMUST00000104304 132 ntBASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Gm15004-201ENSMUST00000119192 630 ntBASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Gm12036-201ENSMUST00000120008 530 ntBASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Gm16570-201ENSMUST00000161951 436 ntBASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.93□□□□□ -0.34
Cpsf3Q9QXK7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Gm19208-201ENSMUST00000213861 912 ntBASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cpsf3Q9QXK7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Gm27530-201ENSMUST00000184096 98 ntBASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Gm3332-201ENSMUST00000189337 928 ntBASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Gm807-202ENSMUST00000224929 408 ntBASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.91□□□□□ -0.34
Cpsf3Q9QXK7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms